| METHOD about: | ../../../doc/explain_methods.html#PX_about_3dpssm |
| METHOD url: | 3D-PSSM |
| TYPE : | fr |
| NPROT : | 665 |
| NWEEKS : | 300 |
| NOTE 1 : | here ALL results obtained for 3D-PSSM in month 2004_06 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2006_11_16 | psum | 5.8 | 3.0 | 4.1 | 7.5 | 23.9 | 33.4 | 87.9 | 7.6 | 44.3 | 50.0 | 138.4 |
| fr | 2004_06 | THIS_month:psum | 7.2 | 2.7 | 12.8 | 11.5 | 23.7 | 35.4 | 93.8 | 2.2 | 47.3 | 54.3 | 104.1 |
| fr | 2004_06 | 1s4k:A | 2.9 | 2.0 | 5.486275e+00 | 7.371979e+00 | 1.7e+00 | 2.6e+00 | 8.6e+01 | 1.31e+00 | 3.3e+01 | 3.5e+01 | 115 |
| fr | 2004_06 | 1s6d:A | 9.9 | 3.7 | 1.175097e+01 | 1.133939e+01 | 4.3e+01 | 6.0e+01 | 9.8e+01 | 2.00e-07 | 5.8e+01 | 6.6e+01 | 103 |
| fr | 2004_06 | 1sr4:C | 12.6 | 2.0 | -4.474810e+00 | 1.291509e+01 | 1.7e+01 | 2.9e+01 | 8.8e+01 | 8.07e-01 | 5.6e+01 | 6.0e+01 | 154 |
| fr | 2004_06 | 1ssz:A | 3.4 | 2.6 | 2.113124e+01 | 2.113123e+01 | 5.0e+01 | 6.2e+01 | 1.0e+02 | 3.49e-05 | 5.9e+01 | 6.8e+01 | 34 |
| fr | 2004_06 | 1tlu:A | 9.2 | 2.3 | -2.141841e+00 | 6.915567e+00 | 1.9e+01 | 3.2e+01 | 9.7e+01 | 1.84e+00 | 4.2e+01 | 5.1e+01 | 117 |
| fr | 2004_06 | 1w0b:A | 5.5 | 3.7 | 1.297646e+01 | 9.380235e+00 | 1.2e+01 | 2.7e+01 | 9.4e+01 | 9.27e+00 | 3.6e+01 | 4.6e+01 | 102 |
| fr | 2004_06 | THIS_month:psum | 7.2 | 2.7 | 12.8 | 11.5 | 23.7 | 35.4 | 93.8 | 2.2 | 47.3 | 54.3 | 104.1 |
| fr | 2006_11_16 | psum | 5.8 | 3.0 | 4.1 | 7.5 | 23.9 | 33.4 | 87.9 | 7.6 | 44.3 | 50.0 | 138.4 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |