| METHOD about: | ../../../doc/explain_methods.html#PX_about_3dpssm |
| METHOD url: | 3D-PSSM |
| TYPE : | fr |
| NPROT : | 665 |
| NWEEKS : | 300 |
| NOTE 1 : | here ALL results obtained for 3D-PSSM in month 2004_06 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2006_11_16 | psum | 4.2 | 2.4 | 2.3 | 4.7 | 16.0 | 23.7 | 78.5 | 7.6 | 35.7 | 41.5 | 138.4 |
| fr | 2004_06 | THIS_month:psum | 4.1 | 2.2 | 6.7 | 5.5 | 10.0 | 13.5 | 83.6 | 2.2 | 36.8 | 40 | 104.1 |
| fr | 2004_06 | 1s4k:A | 2.1 | 1.6 | 5.486275e+00 | 4.419624e+00 | 1.7e+00 | 2.6e+00 | 8.5e+01 | 1.31e+00 | 3.3e+01 | 3.5e+01 | 115 |
| fr | 2004_06 | 1s6d:A | 8.6 | 2.6 | 6.205901e+00 | 1.296078e+00 | 5.8e+00 | 2.1e+01 | 9.8e+01 | 2.00e-07 | 5.3e+01 | 5.8e+01 | 103 |
| fr | 2004_06 | 1sr4:C | 1.3 | 1.2 | -4.474810e+00 | -3.552664e+00 | 1.3e+00 | 3.9e+00 | 8.8e+01 | 8.07e-01 | 1.2e+01 | 1.2e+01 | 154 |
| fr | 2004_06 | 1ssz:A | 1.6 | 2.6 | -3.393333e+01 | -1.796471e+01 | 5.0e+01 | 5.0e+01 | 5.3e+01 | 3.49e-05 | 4.7e+01 | 4.7e+01 | 34 |
| fr | 2004_06 | 1tlu:A | 5.8 | 2.0 | -3.773046e+00 | 6.915567e+00 | 1.7e+00 | 2.6e+00 | 8.4e+01 | 1.84e+00 | 4.2e+01 | 5.0e+01 | 117 |
| fr | 2004_06 | 1w0b:A | 5.5 | 3.5 | 8.578768e+00 | 9.380235e+00 | 0.0e+00 | 9.8e-01 | 9.4e+01 | 9.27e+00 | 3.4e+01 | 3.8e+01 | 102 |
| fr | 2004_06 | THIS_month:psum | 4.1 | 2.2 | 6.7 | 5.5 | 10.0 | 13.5 | 83.6 | 2.2 | 36.8 | 40 | 104.1 |
| fr | 2006_11_16 | psum | 4.2 | 2.4 | 2.3 | 4.7 | 16.0 | 23.7 | 78.5 | 7.6 | 35.7 | 41.5 | 138.4 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |