| METHOD about: | ../../../doc/explain_methods.html#PX_about_3dpssm |
| METHOD url: | 3D-PSSM |
| TYPE : | fr |
| NPROT : | 665 |
| NWEEKS : | 300 |
| NOTE 1 : | here ALL results obtained for 3D-PSSM in month 2004_03 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2006_11_16 | psum | 5.8 | 3.0 | 4.1 | 7.5 | 23.9 | 33.4 | 87.9 | 7.6 | 44.3 | 50.0 | 138.4 |
| fr | 2004_03 | THIS_month:psum | 5.7 | 3.1 | 12.5 | 11.0 | 32.9 | 42.9 | 90 | 16.9 | 52.9 | 57.3 | 88.4 |
| fr | 2004_03 | 1oyi:A | 9.0 | 4.4 | -7.977058e+00 | 2.366801e+01 | 8.2e+01 | 9.0e+01 | 1.0e+02 | 4.97e-04 | 8.5e+01 | 9.0e+01 | 62 |
| fr | 2004_03 | 1pgy:A | 6.5 | 3.3 | 1.579739e+01 | 2.684909e+00 | 5.5e+01 | 8.1e+01 | 9.8e+01 | 6.70e+00 | 7.2e+01 | 8.1e+01 | 47 |
| fr | 2004_03 | 1pjv:A | 4.3 | 3.7 | 2.926327e+01 | 2.834863e+01 | 9.7e+01 | 9.7e+01 | 1.0e+02 | 1.06e+01 | 9.7e+01 | 9.7e+01 | 32 |
| fr | 2004_03 | 1q8b:A | 9.7 | 2.8 | -7.065399e+00 | 6.501983e+00 | 2.8e+01 | 3.7e+01 | 9.6e+01 | 5.59e+00 | 5.8e+01 | 6.3e+01 | 89 |
| fr | 2004_03 | 1qw2:A | 4.4 | 2.3 | -8.253998e+00 | 2.724149e+00 | 9.3e+00 | 1.6e+01 | 7.6e+01 | 1.36e+00 | 2.0e+01 | 2.4e+01 | 97 |
| fr | 2004_03 | 1r4g:A | 7.6 | 4.2 | -1.221600e+01 | 2.277453e+01 | 8.1e+01 | 9.1e+01 | 9.4e+01 | 1.07e-04 | 8.9e+01 | 9.1e+01 | 53 |
| fr | 2004_03 | 1r4v:A | 2.5 | 3.1 | -3.560821e+00 | 4.307707e+00 | 1.4e+00 | 2.1e+00 | 9.7e+01 | 4.38e+00 | 2.8e+01 | 3.2e+01 | 145 |
| fr | 2004_03 | 1rkl:A | 2.7 | 2.8 | 7.607600e+00 | 6.142454e+00 | 5.6e+01 | 6.1e+01 | 8.6e+01 | 4.39e+01 | 6.4e+01 | 6.7e+01 | 36 |
| fr | 2004_03 | 1rqt:A | 1.3 | 2.8 | -1.801881e+01 | -1.644795e+01 | 1.4e+01 | 3.0e+01 | 7.8e+01 | 7.27e+01 | 4.6e+01 | 4.6e+01 | 37 |
| fr | 2004_03 | 1s4z:C | 0.8 | 1.2 | -2.349231e+01 | -2.036000e+01 | 1.3e+01 | 3.7e+01 | 8.7e+01 | 1.10e+02 | 5.7e+01 | 5.7e+01 | 30 |
| fr | 2004_03 | 1ul7:A | 3.1 | 2.3 | 5.930224e+00 | 2.767214e+00 | 2.9e+00 | 7.8e+00 | 7.9e+01 | 1.07e+00 | 3.3e+01 | 4.0e+01 | 102 |
| fr | 2004_03 | 1ut4:A | 1.5 | 2.6 | -3.566677e+00 | -2.579253e+00 | 3.4e+00 | 8.2e+00 | 9.5e+01 | 1.04e+00 | 2.4e+01 | 2.7e+01 | 146 |
| fr | 2004_03 | 1uw1:A | 1.3 | 2.0 | -9.689786e+00 | -4.780192e+00 | 7.5e+00 | 1.5e+01 | 9.4e+01 | 1.86e+01 | 3.4e+01 | 3.9e+01 | 67 |
| fr | 2004_03 | 1uw4:B | 19.5 | 4.4 | -2.599149e+00 | 4.974628e+00 | 2.8e+01 | 4.4e+01 | 9.5e+01 | 3.83e-02 | 5.0e+01 | 5.9e+01 | 248 |
| fr | 2004_03 | 1v74:A | 4.4 | 3.3 | -7.185882e+00 | -2.769924e+00 | 5.6e+00 | 9.3e+00 | 7.9e+01 | 1.97e+00 | 3.3e+01 | 3.6e+01 | 107 |
| fr | 2004_03 | 1v74:B | 3.7 | 3.7 | 3.787996e+00 | 4.080383e+00 | 8.0e+00 | 2.3e+01 | 7.9e+01 | 9.73e+00 | 3.1e+01 | 4.3e+01 | 87 |
| fr | 2004_03 | 1vjh:A | 15.0 | 4.4 | 1.303155e+01 | 2.306349e+01 | 6.8e+01 | 8.1e+01 | 9.7e+01 | 3.64e-02 | 7.9e+01 | 8.3e+01 | 118 |
| fr | 2004_03 | THIS_month:psum | 5.7 | 3.1 | 12.5 | 11.0 | 32.9 | 42.9 | 90 | 16.9 | 52.9 | 57.3 | 88.4 |
| fr | 2006_11_16 | psum | 5.8 | 3.0 | 4.1 | 7.5 | 23.9 | 33.4 | 87.9 | 7.6 | 44.3 | 50.0 | 138.4 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |